Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Cytoskeleton Organization (GO:0007010) Genes Targeted by hsa-mir-320c in CA Colon Graudens Cluster 38 Table contains all genes in the CA Colon Graudens cluster number 38. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-320c GO:0007010 9134 CCNE2 cyclin E2 [Source:HGNC Symbol;Acc:1590] zzz999 1153 CIRBP cold inducible RNA binding protein [Source:HGNC Symbol;Acc:1982] zzz999 23187 PHLDB1 pleckstrin homology-like domain, family B, member 1 [Source:HGNC Symbol;Acc:23697] zzz999 79671 NLRX1 NLR family member X1 [Source:HGNC Symbol;Acc:29890] zzz999 29015 SLC43A3 solute carrier family 43, member 3 [Source:HGNC Symbol;Acc:17466] zzz999 9590 AKAP12 A kinase (PRKA) anchor protein 12 [Source:HGNC Symbol;Acc:370] zzz999 4212 MEIS2 Meis homeobox 2 [Source:HGNC Symbol;Acc:7001] P 8613 PPAP2B phosphatidic acid phosphatase type 2B [Source:HGNC Symbol;Acc:9229] zzz999 23022 PALLD palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:17068] P Yes 1291 COL6A1 collagen, type VI, alpha 1 [Source:HGNC Symbol;Acc:2211] zzz999 50615 IL21R interleukin 21 receptor [Source:HGNC Symbol;Acc:6006] zzz999 51177 PLEKHO1 pleckstrin homology domain containing, family O member 1 [Source:HGNC Symbol;Acc:24310] zzz999 54820 NDE1 nudE nuclear distribution gene E homolog 1 (A. nidulans) [Source:HGNC Symbol;Acc:17619] zzz999 Yes 1783 DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 [Source:HGNC Symbol;Acc:2966] zzz999 64393 ZMAT3 zinc finger, matrin-type 3 [Source:HGNC Symbol;Acc:29983] P 4947 OAZ2 ornithine decarboxylase antizyme 2 [Source:HGNC Symbol;Acc:8096] P 84295 PHF6 PHD finger protein 6 [Source:HGNC Symbol;Acc:18145] P 2533 FYB FYN binding protein [Source:HGNC Symbol;Acc:4036] zzz999 80349 WDR61 WD repeat domain 61 [Source:HGNC Symbol;Acc:30300] zzz999 1465 CSRP1 cysteine and glycine-rich protein 1 [Source:HGNC Symbol;Acc:2469] zzz999 79109 MAPKAP1 mitogen-activated protein kinase associated protein 1 [Source:HGNC Symbol;Acc:18752] zzz999 6876 TAGLN transgelin [Source:HGNC Symbol;Acc:11553] zzz999 118 ADD1 adducin 1 (alpha) [Source:HGNC Symbol;Acc:243] zzz999 Yes 4921 DDR2 discoidin domain receptor tyrosine kinase 2 [Source:HGNC Symbol;Acc:2731] zzz999 23157 SEPT6 septin 6 [Source:HGNC Symbol;Acc:15848] P 10049 DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 [Source:HGNC Symbol;Acc:14888] zzz999 Yes 800 CALD1 caldesmon 1 [Source:HGNC Symbol;Acc:1441] P Yes 3122 HLA-DRA major histocompatibility complex, class II, DR alpha [Source:HGNC Symbol;Acc:4947] zzz999 91754 NEK9 NIMA (never in mitosis gene a)- related kinase 9 [Source:HGNC Symbol;Acc:18591] P 667 DST dystonin [Source:HGNC Symbol;Acc:1090] zzz999 Yes 7169 TPM2 tropomyosin 2 (beta) [Source:HGNC Symbol;Acc:12011] zzz999 85377 MICALL1 MICAL-like 1 [Source:HGNC Symbol;Acc:29804] zzz999 56940 DUSP22 dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:16077] zzz999 2992 GYG1 glycogenin 1 [Source:HGNC Symbol;Acc:4699] zzz999 3855 KRT7 keratin 7 [Source:HGNC Symbol;Acc:6445] zzz999 Yes 8470 SORBS2 sorbin and SH3 domain containing 2 [Source:HGNC Symbol;Acc:24098] P 65982 ZSCAN18 zinc finger and SCAN domain containing 18 [Source:HGNC Symbol;Acc:21037] zzz999 1112 FOXN3 forkhead box N3 [Source:HGNC Symbol;Acc:1928] P 5327 PLAT plasminogen activator, tissue [Source:HGNC Symbol;Acc:9051] zzz999 818 CAMK2G calcium/calmodulin-dependent protein kinase II gamma [Source:HGNC Symbol;Acc:1463] zzz999 3109 HLA-DMB major histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:4935] zzz999 2982 GUCY1A3 guanylate cyclase 1, soluble, alpha 3 [Source:HGNC Symbol;Acc:4685] zzz999 284119 PTRF polymerase I and transcript release factor [Source:HGNC Symbol;Acc:9688] zzz999 27349 MCAT malonyl CoA:ACP acyltransferase (mitochondrial) [Source:HGNC Symbol;Acc:29622] zzz999 1410 CRYAB crystallin, alpha B [Source:HGNC Symbol;Acc:2389] zzz999 Yes 54629 FAM63B family with sequence similarity 63, member B [Source:HGNC Symbol;Acc:26954] P 83716 CRISPLD2 cysteine-rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:25248] zzz999 79827 CLMP CXADR-like membrane protein [Source:HGNC Symbol;Acc:24039] zzz999 26353 HSPB8 heat shock 22kDa protein 8 [Source:HGNC Symbol;Acc:30171] zzz999 80760 ITIH5 inter-alpha (globulin) inhibitor H5 [Source:HGNC Symbol;Acc:21449] zzz999 10486 CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:HGNC Symbol;Acc:20039] zzz999 Yes 3936 LCP1 lymphocyte cytosolic protein 1 (L-plastin) [Source:HGNC Symbol;Acc:6528] zzz999 Yes 8435 SOAT2 sterol O-acyltransferase 2 [Source:HGNC Symbol;Acc:11178] zzz999 3113 HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 [Source:HGNC Symbol;Acc:4938] zzz999 57721 METTL14 methyltransferase like 14 [Source:HGNC Symbol;Acc:29330] zzz999 23060 ZNF609 zinc finger protein 609 [Source:HGNC Symbol;Acc:29003] zzz999 7168 TPM1 tropomyosin 1 (alpha) [Source:HGNC Symbol;Acc:12010] zzz999 Yes 5997 RGS2 regulator of G-protein signaling 2, 24kDa [Source:HGNC Symbol;Acc:9998] zzz999 7041 TGFB1I1 transforming growth factor beta 1 induced transcript 1 [Source:HGNC Symbol;Acc:11767] zzz999 4070 TACSTD2 tumor-associated calcium signal transducer 2 [Source:HGNC Symbol;Acc:11530] zzz999 10398 MYL9 myosin, light chain 9, regulatory [Source:HGNC Symbol;Acc:15754] zzz999 72 ACTG2 actin, gamma 2, smooth muscle, enteric [Source:HGNC Symbol;Acc:145] zzz999 90799 CEP95 centrosomal protein 95kDa [Source:HGNC Symbol;Acc:25141] zzz999 5354 PLP1 proteolipid protein 1 [Source:HGNC Symbol;Acc:9086] zzz999 1776 DNASE1L3 deoxyribonuclease I-like 3 [Source:HGNC Symbol;Acc:2959] zzz999 85012 TCEAL3 transcription elongation factor A (SII)-like 3 [Source:HGNC Symbol;Acc:28247] zzz999 53826 FXYD6 FXYD domain containing ion transport regulator 6 [Source:HGNC Symbol;Acc:4030] zzz999 64333 ARHGAP9 Rho GTPase activating protein 9 [Source:HGNC Symbol;Acc:14130] zzz999 64928 MRPL14 mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:14279] zzz999 80301 PLEKHO2 pleckstrin homology domain containing, family O member 2 [Source:HGNC Symbol;Acc:30026] zzz999 23216 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:HGNC Symbol;Acc:11578] zzz999 5507 PPP1R3C protein phosphatase 1, regulatory (inhibitor) subunit 3C [Source:HGNC Symbol;Acc:9293] zzz999 9260 PDLIM7 PDZ and LIM domain 7 (enigma) [Source:HGNC Symbol;Acc:22958] zzz999 Yes 55742 PARVA parvin, alpha [Source:HGNC Symbol;Acc:14652] zzz999 Yes 26167 PCDHB5 protocadherin beta 5 [Source:HGNC Symbol;Acc:8690] zzz999 3611 ILK integrin-linked kinase [Source:HGNC Symbol;Acc:6040] zzz999 Yes 89927 C16orf45 chromosome 16 open reading frame 45 [Source:HGNC Symbol;Acc:19213] zzz999 477 ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:HGNC Symbol;Acc:800] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.